BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018H10LP1|AL427401
(982 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1111 1847 0.0
>3x_Contig1111
Length = 6610
Score = 1847 bits (921), Expect = 0.0
Identities = 962/983 (97%), Gaps = 1/983 (0%)
Strand = Plus / Minus
Query: 1 gatcattgcccactcagaattccttcasgggataccgatagtactagagacaccacaaaa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2436 gatcattgcccactcagaattccttcaggggataccgatagtactagagacaccacaaaa 2377
Query: 61 ggaagacgctggctacggtgaagaaatcaaactattggaatggctagaaactatagatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2376 ggaagacgctggctacggtgaagaaatcaaactattggaatggctagaaactatagatga 2317
Query: 121 agaggaaaacaaagactacatcgagaagagattagcattgaataaactaggagamaagtc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2316 agaggaaaacaaagactacatcgagaagagattagcattgaataaactaggagaaaagtc 2257
Query: 181 ccgtaaagaattccaagctaagtttgataagaagaacaagtccacaaagaccactaaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2256 ccgtaaagaattccaagctaagtttgataagaagaacaagtccacaaagaccactaaatc 2197
Query: 241 tactaagaggaaaggaccttctatcacggaacaactgacaaahaagacaaagaaaacaaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2196 tactaagaggaaaggaccttctatcacggaacaactgacaaaaaagacaaagaaaacaaa 2137
Query: 301 gtcttaatactgcacctaaatatgtagaaattatgacagcmtatgttttttwaccttttt 360
||||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||||
Sbjct: 2136 gtcttaatactgcacctaaatatgtagaaataatgacagcatatgtattttaaccttttt 2077
Query: 361 atttaatcagcagttctttcgttcttccaacattgaggtcaacaagcgaatgcttatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2076 atttaatcagcagttctttcgttcttccaacattgaggtcaacaagcgaatgcttatcat 2017
Query: 421 atctatggvaahmywahagttcaaccctatgtcagggatcgacgtaatatcgtctgcyca 480
|||||||| || | |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2016 atctatggaaaaaaaaaagttcaaccctatgtcagggatcgacgtaatatcgtctgcaca 1957
Query: 481 aacatttaawgttttgatttttttgggtcgagggagttaagataagttcagtcgtgaaaa 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1956 aacatttaaagttttgatttttttgggtcgagggagttaagataagttcagtcgtgaaaa 1897
Query: 541 tgggttcgaagtatttgtgtttgttttgttaactctttcggaatcgctacggtagtcaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1896 tgggttcgaagtatttgtgtttgttttgttaactctttcggaatcgctacggtagtcaaa 1837
Query: 601 gctcgayagttccactcacctagcttgttacattacaaatwtctgtgtatttggtactgt 660
|||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1836 gctcgaaagtaccactcacctagcttgttacattacaaatatctgtgtatttggtactgt 1777
Query: 661 attagggtgcttttttcacattttgtttgcaatagagcaaagaaaagaacaaacacagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1776 attagggtgcttttttcacattttgtttgcaatagagcaaagaaaagaacaaacacagaa 1717
Query: 721 atattatattcactggaaggtttttagaacaagtggggcaattgttgtttttggataaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1716 atattatattcactggaaggtttttagaacaagtggggcaattgttgtttttggataaac 1657
Query: 781 gtaagtycagagctcaactggacccatctgccaagctatgaatgatatggatactagaac 840
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1656 gtaagtacagagctcaactggacccatctgccaagctatgaatgatatggatactagaac 1597
Query: 841 tgaacctaatgtccagctgacagagacaccaaagcttgcccagagagagtttgcaggagg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1596 tgaacctaatgtccagctgacagagacaccaaagcttgcccagagagagtttgcaggagg 1537
Query: 901 agatgcggagtcatcggtcaagaatcagcttccggagatcaattcgagtyttaatagaga 960
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1536 agatgcggagtcatcggtcaagaatcagcttccggagatcaattcgagtcttaatagaga 1477
Query: 961 ggc-atcgatgttggtatgttgc 982
||| |||||||||||||||||||
Sbjct: 1476 ggcaatcgatgttggtatgttgc 1454
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6960
Number of Sequences: 1807
Number of extensions: 6960
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 982
length of database: 10,358,551
effective HSP length: 16
effective length of query: 966
effective length of database: 10,329,639
effective search space: 9978431274
effective search space used: 9978431274
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)